Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NPIPB4C9JG80 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 CDV3P1-201ENST00000471403 739 ntBASIC18.29■□□□□ 0.52
NPIPB4C9JG80 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 AL162412.1-201ENST00000567129 965 ntBASIC18.29■□□□□ 0.52
NPIPB4C9JG80 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPIPB4C9JG80 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 LINC01006-201ENST00000333319 2292 ntBASIC18.28■□□□□ 0.52
NPIPB4C9JG80 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 AC007322.4-201ENST00000509611 723 ntBASIC18.28■□□□□ 0.52
NPIPB4C9JG80 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPIPB4C9JG80 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 AC026271.2-201ENST00000428091 497 ntBASIC18.27■□□□□ 0.52
NPIPB4C9JG80 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 AC010536.3-201ENST00000620306 533 ntBASIC18.27■□□□□ 0.52
NPIPB4C9JG80 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPIPB4C9JG80 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NPIPB4C9JG80 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 FAM21FP-204ENST00000608637 956 ntBASIC18.26■□□□□ 0.51
NPIPB4C9JG80 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.26■□□□□ 0.51
NPIPB4C9JG80 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.25■□□□□ 0.51
NPIPB4C9JG80 KRT18P5-201ENST00000436075 1291 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms