Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 AC007322.3-201ENST00000426526 701 ntBASIC16.29■□□□□ 0.2
LINC01548A6NM66 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 AL162412.1-201ENST00000567129 965 ntBASIC16.29■□□□□ 0.2
LINC01548A6NM66 AC069236.1-201ENST00000604339 616 ntBASIC16.29■□□□□ 0.2
LINC01548A6NM66 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 AC008694.1-202ENST00000636953 945 ntBASIC16.29■□□□□ 0.2
LINC01548A6NM66 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC01548A6NM66 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01548A6NM66 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 PLK5-205ENST00000642079 1969 ntBASIC16.28■□□□□ 0.2
LINC01548A6NM66 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 GUSBP6-202ENST00000438529 1198 ntBASIC16.28■□□□□ 0.2
LINC01548A6NM66 TSPY6P-201ENST00000448518 926 ntBASIC16.28■□□□□ 0.2
LINC01548A6NM66 CDV3P1-201ENST00000471403 739 ntBASIC16.28■□□□□ 0.2
LINC01548A6NM66 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 OR10C1-204ENST00000622521 1039 ntBASIC16.28■□□□□ 0.2
LINC01548A6NM66 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LINC01548A6NM66 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01548A6NM66 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01548A6NM66 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01548A6NM66 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01548A6NM66 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01548A6NM66 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01548A6NM66 AL355472.2-201ENST00000422958 438 ntBASIC16.27■□□□□ 0.2
LINC01548A6NM66 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC01548A6NM66 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01548A6NM66 AC121338.2-201ENST00000622535 1744 ntBASIC16.27■□□□□ 0.19
LINC01548A6NM66 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
LINC01548A6NM66 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01548A6NM66 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01548A6NM66 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01548A6NM66 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01548A6NM66 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC01548A6NM66 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 FAM21FP-204ENST00000608637 956 ntBASIC16.26■□□□□ 0.19
LINC01548A6NM66 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01548A6NM66 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01548A6NM66 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms