Protein–RNA interactions for Protein: A6NLE4

SMIM23, Small integral membrane protein 23, humanhuman

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23A6NLE4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SMIM23A6NLE4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.06■□□□□ 0.96
SMIM23A6NLE4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM23A6NLE4 AC099778.1-201ENST00000568593 1911 ntBASIC21.06■□□□□ 0.96
SMIM23A6NLE4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.05■□□□□ 0.96
SMIM23A6NLE4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 AL356740.2-201ENST00000601559 647 ntBASIC21.05■□□□□ 0.96
SMIM23A6NLE4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM23A6NLE4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM23A6NLE4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.03■□□□□ 0.96
SMIM23A6NLE4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 AL162377.1-201ENST00000618844 1793 ntBASIC21.02■□□□□ 0.96
SMIM23A6NLE4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.02■□□□□ 0.96
SMIM23A6NLE4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM23A6NLE4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms