Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 MIPEPP3-201ENST00000412105 444 ntBASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 POU5F1P4-201ENST00000413175 1085 ntBASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TUBAL3A6NHL2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 AC098934.4-201ENST00000564127 592 ntBASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TUBAL3A6NHL2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 AL512625.2-201ENST00000417533 625 ntBASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 RNA5SP413-201ENST00000516373 109 ntBASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TUBAL3A6NHL2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TUBAL3A6NHL2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.42■□□□□ 0.54
TUBAL3A6NHL2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms