Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 AC133561.1-201ENST00000568600 2415 ntBASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 AC092368.3-202ENST00000574180 1591 ntBASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC144AA2RUR9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 SLC29A4P2-201ENST00000504749 1089 ntBASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 AC073648.6-201ENST00000641589 218 ntBASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CCDC144AA2RUR9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC144AA2RUR9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC144AA2RUR9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC144AA2RUR9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 EP400NL-214ENST00000641289 2402 ntBASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 PGM5P4-201ENST00000421970 445 ntBASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 Z98882.1-201ENST00000622160 2253 ntBASIC29.78■■■□□ 2.36
CCDC144AA2RUR9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
CCDC144AA2RUR9 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.36
CCDC144AA2RUR9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 SOX15-203ENST00000570788 1093 ntBASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 AL356652.1-201ENST00000615962 565 ntBASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC29.76■■■□□ 2.35
CCDC144AA2RUR9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms