Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HFM1A2PYH4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
HFM1A2PYH4 AC026310.3-201ENST00000625186 2373 ntBASIC30.74■■■□□ 2.51
HFM1A2PYH4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
HFM1A2PYH4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HFM1A2PYH4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.73■■■□□ 2.51
HFM1A2PYH4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC30.73■■■□□ 2.51
HFM1A2PYH4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HFM1A2PYH4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HFM1A2PYH4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.73■■■□□ 2.51
HFM1A2PYH4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
HFM1A2PYH4 AL589743.5-201ENST00000616611 1050 ntBASIC30.73■■■□□ 2.51
HFM1A2PYH4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.73■■■□□ 2.51
HFM1A2PYH4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC30.72■■■□□ 2.51
HFM1A2PYH4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC30.72■■■□□ 2.51
HFM1A2PYH4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
HFM1A2PYH4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
HFM1A2PYH4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC30.72■■■□□ 2.51
HFM1A2PYH4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.72■■■□□ 2.51
HFM1A2PYH4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.72■■■□□ 2.51
HFM1A2PYH4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
HFM1A2PYH4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
HFM1A2PYH4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
HFM1A2PYH4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
HFM1A2PYH4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC30.71■■■□□ 2.51
HFM1A2PYH4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
HFM1A2PYH4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
HFM1A2PYH4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
HFM1A2PYH4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
HFM1A2PYH4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.71■■■□□ 2.51
HFM1A2PYH4 CD99P1-205ENST00000527459 561 ntBASIC30.71■■■□□ 2.51
HFM1A2PYH4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC30.7■■■□□ 2.51
HFM1A2PYH4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
HFM1A2PYH4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.7■■■□□ 2.5
HFM1A2PYH4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
HFM1A2PYH4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.7■■■□□ 2.5
HFM1A2PYH4 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.7■■■□□ 2.5
HFM1A2PYH4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.7■■■□□ 2.5
HFM1A2PYH4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.7■■■□□ 2.5
HFM1A2PYH4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.7■■■□□ 2.5
HFM1A2PYH4 MIR4651-201ENST00000582622 73 ntBASIC30.7■■■□□ 2.5
HFM1A2PYH4 TMEM191A-211ENST00000637163 1067 ntBASIC30.7■■■□□ 2.5
HFM1A2PYH4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.7■■■□□ 2.5
HFM1A2PYH4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
HFM1A2PYH4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 KRT18P68-201ENST00000392293 1000 ntBASIC30.69■■■□□ 2.5
HFM1A2PYH4 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.69■■■□□ 2.5
HFM1A2PYH4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
HFM1A2PYH4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
HFM1A2PYH4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
HFM1A2PYH4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
HFM1A2PYH4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
HFM1A2PYH4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
HFM1A2PYH4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC30.68■■■□□ 2.5
HFM1A2PYH4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
HFM1A2PYH4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC30.68■■■□□ 2.5
HFM1A2PYH4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
HFM1A2PYH4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
HFM1A2PYH4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
HFM1A2PYH4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
HFM1A2PYH4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC30.68■■■□□ 2.5
HFM1A2PYH4 AF106564.1-201ENST00000607058 2553 ntBASIC30.68■■■□□ 2.5
HFM1A2PYH4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HFM1A2PYH4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HFM1A2PYH4 LSM12P1-201ENST00000411836 588 ntBASIC30.67■■■□□ 2.5
HFM1A2PYH4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC30.67■■■□□ 2.5
HFM1A2PYH4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
HFM1A2PYH4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC30.67■■■□□ 2.5
HFM1A2PYH4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC30.66■■■□□ 2.5
HFM1A2PYH4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
HFM1A2PYH4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.66■■■□□ 2.5
HFM1A2PYH4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HFM1A2PYH4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
HFM1A2PYH4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
HFM1A2PYH4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC30.66■■■□□ 2.5
HFM1A2PYH4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
HFM1A2PYH4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC30.65■■■□□ 2.5
HFM1A2PYH4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC30.65■■■□□ 2.5
HFM1A2PYH4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
HFM1A2PYH4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
HFM1A2PYH4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC30.64■■■□□ 2.5
HFM1A2PYH4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
HFM1A2PYH4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
HFM1A2PYH4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
HFM1A2PYH4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
HFM1A2PYH4 AC027702.1-201ENST00000563810 1770 ntBASIC30.64■■■□□ 2.5
HFM1A2PYH4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
HFM1A2PYH4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.49
HFM1A2PYH4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.64■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms