Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AC005224.4-201ENST00000583262 1652 ntBASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 AC116562.4-201ENST00000641316 2276 ntBASIC15.4■□□□□ 0.06
TRBV6-1A0A0K0K1D8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
TRBV6-1A0A0K0K1D8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AC053503.5-201ENST00000601508 636 ntBASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 EEF1DP3-203ENST00000566025 782 ntBASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-1A0A0K0K1D8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms