Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 BX323043.1-201ENST00000641006 1765 ntBASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 AP004607.4-201ENST00000530158 1459 ntBASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-5A0A0K0K1A5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 GUSBP5-201ENST00000418136 578 ntBASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-5A0A0K0K1A5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV6-5A0A0K0K1A5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRBV6-5A0A0K0K1A5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRBV6-5A0A0K0K1A5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 AC053503.5-201ENST00000601508 636 ntBASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-5A0A0K0K1A5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 IGHV3-19-201ENST00000521488 291 ntBASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRBV6-5A0A0K0K1A5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms