Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV5-4A0A0C4DH59 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 CYP2T1P-201ENST00000432607 1285 ntBASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 RARRES2P4-201ENST00000514074 484 ntBASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC092666.2-201ENST00000613287 246 ntBASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC007225.1-201ENST00000566331 1836 ntBASIC20.36■□□□□ 0.85
TRBV5-4A0A0C4DH59 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TRBV5-4A0A0C4DH59 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 MIR2861-201ENST00000636310 90 ntBASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV5-4A0A0C4DH59 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC026185.1-201ENST00000445748 174 ntBASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC005181.1-201ENST00000604782 1256 ntBASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC100791.3-201ENST00000617619 330 ntBASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.33■□□□□ 0.85
TRBV5-4A0A0C4DH59 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV5-4A0A0C4DH59 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV5-4A0A0C4DH59 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.33■□□□□ 0.84
TRBV5-4A0A0C4DH59 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.33■□□□□ 0.84
TRBV5-4A0A0C4DH59 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV5-4A0A0C4DH59 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-4A0A0C4DH59 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.32■□□□□ 0.84
TRBV5-4A0A0C4DH59 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.32■□□□□ 0.84
TRBV5-4A0A0C4DH59 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.32■□□□□ 0.84
TRBV5-4A0A0C4DH59 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-4A0A0C4DH59 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV5-4A0A0C4DH59 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms