Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV4A0A0B4J268 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 AC010141.2-201ENST00000452426 721 ntBASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 KRT16P2-201ENST00000414673 1423 ntBASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV4A0A0B4J268 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L2-201ENST00000561772 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 TERF1P2-201ENST00000583350 1212 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L6-201ENST00000626483 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L1-201ENST00000627662 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L8-201ENST00000629013 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L3-201ENST00000630187 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L7-201ENST00000630678 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 DUX4L5-201ENST00000630834 1275 ntBASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV4A0A0B4J268 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV4A0A0B4J268 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms