Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV3-43A0A0B4J1X8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGHV3-43A0A0B4J1X8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 FEM1AP1-201ENST00000431297 1995 ntBASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AC073130.3-201ENST00000624389 2278 ntBASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGHV3-43A0A0B4J1X8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AC010141.2-201ENST00000452426 721 ntBASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 SLC7A5P2-201ENST00000553010 536 ntBASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AC004854.2-201ENST00000608450 1441 ntBASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 AIRN-201ENST00000601203 4374 ntBASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGHV3-43A0A0B4J1X8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
IGHV3-43A0A0B4J1X8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.08■□□□□ 0.33
IGHV3-43A0A0B4J1X8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
IGHV3-43A0A0B4J1X8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IGHV3-43A0A0B4J1X8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L2-201ENST00000561772 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AP001160.3-201ENST00000601484 763 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC120498.10-201ENST00000621827 505 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L6-201ENST00000626483 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L1-201ENST00000627662 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L8-201ENST00000629013 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L3-201ENST00000630187 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L7-201ENST00000630678 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DUX4L5-201ENST00000630834 1275 ntBASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IGHV3-43A0A0B4J1X8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 FP700111.2-201ENST00000619190 1892 ntBASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms