Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 CCT7P2-201ENST00000479109 1454 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 PGCP1-202ENST00000436252 1358 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 RN7SKP163-201ENST00000363221 330 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 OR52J3-201ENST00000380370 936 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
SLC1A1P43005 MLANA-201ENST00000381471 1000 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 RPSAP26-201ENST00000442699 741 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 BX293535.1-201ENST00000443579 283 ntTSL 3 BASIC9.94□□□□□ -0.82
SLC1A1P43005 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC9.94□□□□□ -0.82
SLC1A1P43005 PRDX2P4-201ENST00000447134 600 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 VDAC1P4-201ENST00000450197 835 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 DMKN-219ENST00000461300 567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 DMKN-239ENST00000474928 577 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 DMKN-253ENST00000488892 414 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 IGHV7-27-201ENST00000522512 330 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 ENPP7P8-203ENST00000529093 317 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 IGHV1OR16-1-201ENST00000568055 392 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 AC103809.1-201ENST00000585167 651 ntTSL 3 BASIC9.94□□□□□ -0.82
SLC1A1P43005 FAAP24-205ENST00000590281 865 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
SLC1A1P43005 RPS16-207ENST00000601655 492 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 Z73429.1-201ENST00000610170 345 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 Metazoa_SRP.142-201ENST00000612810 316 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 LINC01730-201ENST00000613868 843 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 IFITM2-206ENST00000616316 892 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 KRTAP10-12-202ENST00000618832 282 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 AL121590.1-201ENST00000621402 458 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 HFE2-207ENST00000636675 1280 ntTSL 5 BASIC9.94□□□□□ -0.82
SLC1A1P43005 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 WNT2B-201ENST00000256640 2819 ntTSL 2 BASIC9.94□□□□□ -0.82
SLC1A1P43005 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 AC108215.1-201ENST00000624463 3226 ntBASIC9.94□□□□□ -0.82
SLC1A1P43005 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
SLC1A1P43005 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC9.93□□□□□ -0.82
SLC1A1P43005 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 PAX6-273ENST00000640610 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 ZNF2-205ENST00000622059 1624 ntTSL 2 BASIC9.93□□□□□ -0.82
SLC1A1P43005 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SLC1A1P43005 CAVIN4-201ENST00000307584 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 DNAAF4-204ENST00000457155 1567 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 TRIM51JP-201ENST00000443564 1320 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 CNR1-205ENST00000468898 1320 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC009055.2-201ENST00000567058 1337 ntTSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 TPI1P1-201ENST00000420977 750 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 FYTTD1P1-201ENST00000424250 921 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC245036.3-201ENST00000429259 146 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC108868.1-201ENST00000431411 554 ntTSL 4 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AL139142.1-201ENST00000431459 677 ntTSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 PSAT1P3-201ENST00000439132 1111 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC064862.2-201ENST00000445460 196 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AL592103.1-201ENST00000446321 810 ntTSL 2 BASIC9.93□□□□□ -0.82
SLC1A1P43005 RPL5P1-201ENST00000460716 894 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC093714.1-201ENST00000470532 1257 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC105460.1-201ENST00000509399 830 ntTSL 3 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC024451.2-201ENST00000519856 1108 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 ADIPOR1P2-201ENST00000554199 820 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC100836.1-201ENST00000557426 877 ntTSL 3 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC005726.6-201ENST00000579019 1083 ntTSL 3 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC032019.1-201ENST00000579100 173 ntTSL 3 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC015688.1-201ENST00000584894 199 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 ZNF426-203ENST00000589289 919 ntTSL 2 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AC020549.2-201ENST00000604893 508 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC007551.2-201ENST00000613889 389 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 AC092139.3-201ENST00000624764 968 ntBASIC9.93□□□□□ -0.82
SLC1A1P43005 THRB-AS1-209ENST00000628911 850 ntTSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SLC1A1P43005 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC9.93□□□□□ -0.82
SLC1A1P43005 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SLC1A1P43005 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC9.92□□□□□ -0.82
SLC1A1P43005 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 NREP-203ENST00000395634 1468 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 LINC01304-204ENST00000454455 2454 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC9.92□□□□□ -0.82
SLC1A1P43005 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
SLC1A1P43005 OR10H4-201ENST00000322107 951 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SLC1A1P43005 SPP2-202ENST00000373368 860 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
SLC1A1P43005 KRTAP13-3-201ENST00000390690 704 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms