Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 C9orf153-201ENST00000339137 1845 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
SNX18Q96RF0 CD36-202ENST00000394788 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SNX18Q96RF0 AC004801.7-201ENST00000624535 2973 ntBASIC8.82□□□□□ -1
SNX18Q96RF0 IL24-204ENST00000391929 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 AP002358.2-201ENST00000532980 2148 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC8.81□□□□□ -1
SNX18Q96RF0 HERC2P8-202ENST00000564334 3705 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 NELL1-203ENST00000357134 3022 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 TOX4-212ENST00000613569 4711 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 EXOSC2-202ENST00000372351 1885 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 LRRC37A4P-202ENST00000581296 5372 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 GSDMB-203ENST00000394175 1626 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 EGFLAM-203ENST00000354891 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 THUMPD1-202ENST00000396083 2624 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 ZBTB39-201ENST00000300101 6170 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 PKD2L2-206ENST00000508883 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 CSH1-202ENST00000329882 1073 ntTSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 RNA5SP194-201ENST00000364662 113 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 AC087491.1-201ENST00000398554 616 ntTSL 3 BASIC8.81□□□□□ -1
SNX18Q96RF0 U40455.1-201ENST00000411473 865 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 HNRNPA1P66-201ENST00000416539 934 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AL117350.1-201ENST00000418348 640 ntTSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 AL450304.1-201ENST00000418657 759 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AL034428.1-201ENST00000425939 1101 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 AL139327.3-201ENST00000433721 379 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AC009948.2-201ENST00000437039 713 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AC006970.1-201ENST00000442064 389 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC8.81□□□□□ -1
SNX18Q96RF0 SPAG11A-206ENST00000454911 521 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 KCNAB1-AS2-201ENST00000473876 538 ntTSL 3 BASIC8.81□□□□□ -1
SNX18Q96RF0 NME9-208ENST00000484930 825 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 CKLF-CMTM1-201ENST00000527729 585 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 RPS27AP16-202ENST00000591758 566 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AL359921.2-201ENST00000608547 543 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AC027228.3-201ENST00000623556 1266 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 AL513327.1-208ENST00000624012 1047 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 PCBP1-AS1-320ENST00000627918 1146 ntTSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 AL355480.3-201ENST00000630128 96 ntBASIC8.81□□□□□ -1
SNX18Q96RF0 TMEM241-201ENST00000383233 2934 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 BBS4-202ENST00000395205 2450 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 TMPPE-201ENST00000342462 3962 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC8.81□□□□□ -1
SNX18Q96RF0 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC8.81□□□□□ -1
SNX18Q96RF0 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
SNX18Q96RF0 AC025678.3-201ENST00000623619 4824 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 GLA-201ENST00000218516 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 MARK3-207ENST00000553942 2298 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 CLDN18-202ENST00000343735 3434 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 NSUN7-201ENST00000316607 3546 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 DIAPH3-202ENST00000377908 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 ASH2LP3-201ENST00000436538 1642 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 CIDEB-203ENST00000554411 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC8.8□□□□□ -1
SNX18Q96RF0 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 OR6Q1-201ENST00000302622 1002 ntAPPRIS P1 BASIC8.8□□□□□ -1
SNX18Q96RF0 OR2T29-201ENST00000328570 1014 ntAPPRIS P1 BASIC8.8□□□□□ -1
SNX18Q96RF0 LINC01560-201ENST00000357412 1253 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 SLAMF8-202ENST00000368104 1038 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
SNX18Q96RF0 C9orf85-203ENST00000377031 1107 ntTSL 3 BASIC8.8□□□□□ -1
SNX18Q96RF0 AC069281.1-201ENST00000392471 570 ntTSL 4 BASIC8.8□□□□□ -1
SNX18Q96RF0 RN7SKP68-201ENST00000411055 307 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 BX284668.1-202ENST00000422345 735 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 NLGN4Y-AS1-201ENST00000434164 532 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 NDUFA9P1-201ENST00000436210 1135 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
SNX18Q96RF0 AC108448.1-201ENST00000455154 293 ntTSL 3 BASIC8.8□□□□□ -1
SNX18Q96RF0 AL133415.1-201ENST00000456355 706 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 PFDN1-203ENST00000510217 1091 ntTSL 2 BASIC8.8□□□□□ -1
SNX18Q96RF0 AC092535.2-201ENST00000513176 1204 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 AC013643.1-201ENST00000518155 310 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 LINC01982-201ENST00000572848 308 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 AC139099.1-204ENST00000575205 425 ntTSL 1 (best) BASIC8.8□□□□□ -1
SNX18Q96RF0 MIR3190-201ENST00000577414 80 ntBASIC8.8□□□□□ -1
SNX18Q96RF0 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC8.8□□□□□ -1
SNX18Q96RF0 ZNF83-218ENST00000601257 704 ntTSL 3 BASIC8.8□□□□□ -1
SNX18Q96RF0 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC8.8□□□□□ -1
SNX18Q96RF0 SVIL-AS1-211ENST00000609413 566 ntTSL 4 BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms