Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 CCDC36-201ENST00000296449 2613 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC069281.1-201ENST00000392471 570 ntTSL 4 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 DYNLL1-202ENST00000392508 697 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AL356273.2-201ENST00000413701 973 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 LINC01090-201ENST00000415357 881 ntTSL 3 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AL450322.1-201ENST00000415358 313 ntTSL 3 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 DSTNP1-201ENST00000419906 465 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 VDAC1P4-201ENST00000450197 835 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 AL109809.2-201ENST00000455216 493 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 ID2-AS1-207ENST00000455965 794 ntTSL 4 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC078814.1-201ENST00000484568 645 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 RN7SL34P-201ENST00000497296 270 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC092435.1-201ENST00000513711 443 ntTSL 3 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 IGKV2-14-201ENST00000517571 347 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 AP003385.4-201ENST00000524977 324 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 OR9G3P-201ENST00000525553 918 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC068205.1-201ENST00000526615 689 ntTSL 3 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 RN7SL192P-201ENST00000584303 299 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC010776.1-201ENST00000588298 542 ntTSL 4 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 Metazoa_SRP.142-201ENST00000612810 316 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 EDRF1-AS1-211ENST00000615461 592 ntTSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AC097493.5-201ENST00000641103 1010 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 CES5A-208ENST00000541580 1669 ntTSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ACTN4P2-201ENST00000473049 1892 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 ZC4H2-201ENST00000337990 2363 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 PYHIN1-205ENST00000392254 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
NPIPA3F8WFD2 LIPM-201ENST00000404743 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
NPIPA3F8WFD2 AL078645.2-201ENST00000245811 1325 ntBASIC8.8□□□□□ -1
NPIPA3F8WFD2 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 LIAS-222ENST00000640888 4041 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 TIGIT-203ENST00000481065 3710 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 CCDC14-201ENST00000310351 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 RAB11FIP1P1-201ENST00000438337 1762 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 HTR3C-201ENST00000318351 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 RTN3-208ENST00000537981 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC068547.1-203ENST00000637559 1373 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 HMHB1-201ENST00000289448 384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 NUDT5-201ENST00000378927 1258 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 RNVU1-1-201ENST00000384610 164 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 RGS10-203ENST00000392865 852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AL353692.1-201ENST00000405081 755 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 CDKN2AIPNLP3-201ENST00000418361 309 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 AL669970.1-201ENST00000444936 450 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 RPSAP18-201ENST00000453374 886 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC017104.1-203ENST00000454416 466 ntTSL 3 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 RN7SL632P-201ENST00000489734 266 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 H2AFZP4-201ENST00000534148 377 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 CNR1-206ENST00000549890 2122 ntAPPRIS P1 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 LINC01852-202ENST00000559232 533 ntTSL 4 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC007749.1-201ENST00000564299 585 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC026461.3-201ENST00000569778 444 ntTSL 2 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 DSTNP2-202ENST00000602547 1105 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 FXYD3-213ENST00000605552 837 ntTSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC005291.2-201ENST00000609088 523 ntTSL 4 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 GOLGA6L17P-201ENST00000611297 586 ntTSL 4 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 Metazoa_SRP.119-201ENST00000613387 291 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 CAMKMT-210ENST00000613618 594 ntTSL 5 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC009152.1-201ENST00000618290 556 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC8.79□□□□□ -1
NPIPA3F8WFD2 AC091953.1-201ENST00000624775 296 ntBASIC8.79□□□□□ -1
NPIPA3F8WFD2 SET-204ENST00000372692 2850 ntTSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC8.79□□□□□ -1
NPIPA3F8WFD2 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms