Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 AL035685.1-201ENST00000636663 812 ntBASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD3-BMI1R4GMX3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 AL049796.1-201ENST00000565336 1766 ntBASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD3-BMI1R4GMX3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD3-BMI1R4GMX3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC026471.6-201ENST00000622954 1905 ntBASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
COMMD3-BMI1R4GMX3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC241377.3-202ENST00000626088 1088 ntBASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC241585.3-202ENST00000628937 1088 ntBASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 AC245100.8-202ENST00000629247 1058 ntBASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD3-BMI1R4GMX3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
COMMD3-BMI1R4GMX3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms