Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 MTDHP1-201ENST00000605323 784 ntBASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC34.81■■■■□ 3.16
BIVM-ERCC5R4GMW8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
BIVM-ERCC5R4GMW8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 AL356652.1-201ENST00000615962 565 ntBASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
BIVM-ERCC5R4GMW8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
BIVM-ERCC5R4GMW8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC34.78■■■■□ 3.16
BIVM-ERCC5R4GMW8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 AC233702.5-201ENST00000584107 538 ntBASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
BIVM-ERCC5R4GMW8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
BIVM-ERCC5R4GMW8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
BIVM-ERCC5R4GMW8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.16
BIVM-ERCC5R4GMW8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC34.76■■■■□ 3.16
BIVM-ERCC5R4GMW8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC34.76■■■■□ 3.15
BIVM-ERCC5R4GMW8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
BIVM-ERCC5R4GMW8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC34.76■■■■□ 3.15
BIVM-ERCC5R4GMW8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC34.75■■■■□ 3.15
BIVM-ERCC5R4GMW8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 GXYLT1P3-201ENST00000453058 1193 ntBASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC34.74■■■■□ 3.15
BIVM-ERCC5R4GMW8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
BIVM-ERCC5R4GMW8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC34.72■■■■□ 3.15
BIVM-ERCC5R4GMW8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms