Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP4B1Q9Y6B7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 AC087239.1-201ENST00000622671 572 ntBASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
AP4B1Q9Y6B7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP4B1Q9Y6B7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP4B1Q9Y6B7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 TSPY26P-201ENST00000476365 1326 ntBASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4B1Q9Y6B7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 ZNRF2P3-201ENST00000424200 374 ntBASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4B1Q9Y6B7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 IRS3P-201ENST00000223076 1006 ntBASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4B1Q9Y6B7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 AC006128.1-201ENST00000624704 1661 ntBASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
AP4B1Q9Y6B7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms