Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 KRT16P2-201ENST00000414673 1423 ntBASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HRH3Q9Y5N1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HRH3Q9Y5N1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 AF106564.1-201ENST00000607058 2553 ntBASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 SLC7A5P1-201ENST00000568957 537 ntBASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 RBM17P2-201ENST00000616397 1405 ntBASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HRH3Q9Y5N1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 CD99P1-205ENST00000527459 561 ntBASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HRH3Q9Y5N1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 AC092667.1-201ENST00000434301 2586 ntBASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 AC026310.3-201ENST00000625186 2373 ntBASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HRH3Q9Y5N1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 TERF1P5-201ENST00000477545 1207 ntBASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 AC133552.2-202ENST00000575694 574 ntBASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.02■□□□□ 0.64
HRH3Q9Y5N1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms