Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.52■□□□□ 0.24
LSM4Q9Y4Z0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LSM4Q9Y4Z0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.52■□□□□ 0.23
LSM4Q9Y4Z0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.52■□□□□ 0.23
LSM4Q9Y4Z0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LSM4Q9Y4Z0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 AP005435.1-201ENST00000529293 1178 ntBASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LSM4Q9Y4Z0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSM4Q9Y4Z0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSM4Q9Y4Z0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms