Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC003957.1-201ENST00000625108 2673 ntBASIC18.39■□□□□ 0.54
COPS3Q9UNS2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
COPS3Q9UNS2 AC020907.5-201ENST00000624372 1936 ntBASIC18.39■□□□□ 0.53
COPS3Q9UNS2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COPS3Q9UNS2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.38■□□□□ 0.53
COPS3Q9UNS2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 AC027682.1-201ENST00000562846 899 ntBASIC18.37■□□□□ 0.53
COPS3Q9UNS2 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.37■□□□□ 0.53
COPS3Q9UNS2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 FP700111.2-201ENST00000619190 1892 ntBASIC18.37■□□□□ 0.53
COPS3Q9UNS2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.37■□□□□ 0.53
COPS3Q9UNS2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 AC096631.2-201ENST00000436136 790 ntBASIC18.36■□□□□ 0.53
COPS3Q9UNS2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 AC131212.1-201ENST00000613771 668 ntBASIC18.36■□□□□ 0.53
COPS3Q9UNS2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPS3Q9UNS2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPS3Q9UNS2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms