Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 AC105036.2-201ENST00000569468 176 ntBASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHA6Q9UN73 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHA6Q9UN73 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDHA6Q9UN73 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 GUSBP6-202ENST00000438529 1198 ntBASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 TSPY6P-201ENST00000448518 926 ntBASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 OR10C1-204ENST00000622521 1039 ntBASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA6Q9UN73 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 AC069236.1-201ENST00000604339 616 ntBASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA6Q9UN73 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 AC093787.1-201ENST00000450396 207 ntBASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 AC008694.1-202ENST00000636953 945 ntBASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 PLK5-205ENST00000642079 1969 ntBASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHA6Q9UN73 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 RARRES2P4-201ENST00000514074 484 ntBASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 AC121338.2-201ENST00000622535 1744 ntBASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHA6Q9UN73 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHA6Q9UN73 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 AC116050.2-201ENST00000612102 1779 ntBASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 AL512625.2-201ENST00000417533 625 ntBASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 CDV3P1-201ENST00000471403 739 ntBASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 AC011484.1-201ENST00000377652 1995 ntBASIC23.65■■□□□ 1.38
PCDHA6Q9UN73 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHA6Q9UN73 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms