Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 AL355472.2-201ENST00000422958 438 ntBASIC19.48■□□□□ 0.71
CTSFQ9UBX1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CTSFQ9UBX1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CTSFQ9UBX1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 ABHD17AP1-201ENST00000358206 933 ntBASIC19.46■□□□□ 0.71
CTSFQ9UBX1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 Z98882.1-201ENST00000622160 2253 ntBASIC19.46■□□□□ 0.71
CTSFQ9UBX1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSFQ9UBX1 KRT17P1-201ENST00000399211 1546 ntBASIC19.46■□□□□ 0.71
CTSFQ9UBX1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.45■□□□□ 0.7
CTSFQ9UBX1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 DUSP5P2-201ENST00000426873 1033 ntBASIC19.45■□□□□ 0.7
CTSFQ9UBX1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 AC083880.1-201ENST00000608266 535 ntBASIC19.45■□□□□ 0.7
CTSFQ9UBX1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSFQ9UBX1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 AC116050.2-201ENST00000612102 1779 ntBASIC19.44■□□□□ 0.7
CTSFQ9UBX1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 LSM12P1-201ENST00000411836 588 ntBASIC19.44■□□□□ 0.7
CTSFQ9UBX1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 MIR4651-201ENST00000582622 73 ntBASIC19.44■□□□□ 0.7
CTSFQ9UBX1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 CYP2T3P-201ENST00000601990 817 ntBASIC19.44■□□□□ 0.7
CTSFQ9UBX1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 MYC-209ENST00000641252 345 ntBASIC19.44■□□□□ 0.7
CTSFQ9UBX1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms