Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.56■□□□□ 0.88
SPASTQ9UBP0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPASTQ9UBP0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPASTQ9UBP0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.56■□□□□ 0.88
SPASTQ9UBP0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPASTQ9UBP0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 BX276092.2-201ENST00000417668 665 ntBASIC20.55■□□□□ 0.88
SPASTQ9UBP0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPASTQ9UBP0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 FAM201B-201ENST00000458407 597 ntBASIC20.54■□□□□ 0.88
SPASTQ9UBP0 RARRES2P4-201ENST00000514074 484 ntBASIC20.54■□□□□ 0.88
SPASTQ9UBP0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 AL024507.2-201ENST00000606070 2574 ntBASIC20.54■□□□□ 0.88
SPASTQ9UBP0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPASTQ9UBP0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPASTQ9UBP0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPASTQ9UBP0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPASTQ9UBP0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPASTQ9UBP0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SPASTQ9UBP0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPASTQ9UBP0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 AC245052.3-201ENST00000450182 901 ntBASIC20.51■□□□□ 0.87
SPASTQ9UBP0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 MIR4651-201ENST00000582622 73 ntBASIC20.51■□□□□ 0.87
SPASTQ9UBP0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 AC010980.2-201ENST00000587099 1412 ntBASIC20.51■□□□□ 0.87
SPASTQ9UBP0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPASTQ9UBP0 FAM99A-202ENST00000538190 1989 ntBASIC20.5■□□□□ 0.87
SPASTQ9UBP0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SPASTQ9UBP0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.5■□□□□ 0.87
SPASTQ9UBP0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms