Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 CYP2T3P-201ENST00000601990 817 ntBASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE7Q9UBL6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE7Q9UBL6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE7Q9UBL6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
CPNE7Q9UBL6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE7Q9UBL6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 DUSP5P2-201ENST00000426873 1033 ntBASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 AC097658.1-201ENST00000475555 843 ntBASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 AC091874.3-201ENST00000512672 1195 ntBASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE7Q9UBL6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 MYC-209ENST00000641252 345 ntBASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 KRT17P1-201ENST00000399211 1546 ntBASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.06■□□□□ 0.8
CPNE7Q9UBL6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 Z98882.1-201ENST00000622160 2253 ntBASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE7Q9UBL6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 ABHD17AP1-201ENST00000358206 933 ntBASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.04■□□□□ 0.8
CPNE7Q9UBL6 AC083880.1-201ENST00000608266 535 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms