Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.45■■□□□ 1.34
RNF216Q9NWF9 RWDD4P1-201ENST00000488019 565 ntBASIC23.45■■□□□ 1.34
RNF216Q9NWF9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 AC079089.2-201ENST00000531211 1277 ntBASIC23.45■■□□□ 1.34
RNF216Q9NWF9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF216Q9NWF9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 AC080038.3-201ENST00000623346 1952 ntBASIC23.44■■□□□ 1.34
RNF216Q9NWF9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 AC240504.1-201ENST00000395709 845 ntBASIC23.44■■□□□ 1.34
RNF216Q9NWF9 MTATP6P17-201ENST00000431030 672 ntBASIC23.44■■□□□ 1.34
RNF216Q9NWF9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 AC009652.1-201ENST00000528326 648 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 AL034346.1-201ENST00000568244 1277 ntBASIC23.44■■□□□ 1.34
RNF216Q9NWF9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 AC006927.4-201ENST00000639187 543 ntBASIC23.44■■□□□ 1.34
RNF216Q9NWF9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RNF216Q9NWF9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AC092053.2-201ENST00000640557 1818 ntBASIC23.43■■□□□ 1.34
RNF216Q9NWF9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AC138965.1-201ENST00000509329 348 ntTSL 3 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
RNF216Q9NWF9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 MIR663A-201ENST00000385250 93 ntBASIC23.42■■□□□ 1.34
RNF216Q9NWF9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.42■■□□□ 1.34
RNF216Q9NWF9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 KRT18P20-201ENST00000548986 1279 ntBASIC23.41■■□□□ 1.34
RNF216Q9NWF9 AC133552.4-201ENST00000576103 676 ntBASIC23.41■■□□□ 1.34
RNF216Q9NWF9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 MFSD11-216ENST00000590393 1141 ntBASIC23.41■■□□□ 1.34
RNF216Q9NWF9 AC087821.1-201ENST00000623639 567 ntBASIC23.41■■□□□ 1.34
RNF216Q9NWF9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF216Q9NWF9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms