Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 AL137784.2-201ENST00000607332 1000 ntBASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCM2LQ9NUG4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 AP004607.7-201ENST00000527152 1677 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 AC034268.1-201ENST00000441047 882 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 pRNA.6-201ENST00000610482 90 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 pRNA.5-201ENST00000612139 90 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 AC011298.3-201ENST00000615796 283 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 pRNA.11-201ENST00000618423 90 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 pRNA.13-201ENST00000619112 90 ntBASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCM2LQ9NUG4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 AC112907.3-201ENST00000577781 2400 ntBASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.61■□□□□ 0.73
CCM2LQ9NUG4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCM2LQ9NUG4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 AL512408.1-201ENST00000569378 2000 ntBASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 OR2I1P-207ENST00000453522 948 ntBASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 AL138724.1-201ENST00000606771 1088 ntBASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCM2LQ9NUG4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.58■□□□□ 0.73
CCM2LQ9NUG4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2LQ9NUG4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCM2LQ9NUG4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.58■□□□□ 0.73
CCM2LQ9NUG4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2LQ9NUG4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCM2LQ9NUG4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.58■□□□□ 0.72
CCM2LQ9NUG4 AC006455.2-201ENST00000429931 906 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms