Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 AC026366.1-201ENST00000488803 879 ntBASIC21.4■■□□□ 1.02
HPS4Q9NQG7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
HPS4Q9NQG7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.02
HPS4Q9NQG7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HPS4Q9NQG7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 AP003097.1-201ENST00000530657 1135 ntBASIC21.38■■□□□ 1.01
HPS4Q9NQG7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HPS4Q9NQG7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 AC073648.6-201ENST00000641589 218 ntBASIC21.37■■□□□ 1.01
HPS4Q9NQG7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.37■■□□□ 1.01
HPS4Q9NQG7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 MCRIP2P1-201ENST00000394346 511 ntBASIC21.36■■□□□ 1.01
HPS4Q9NQG7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 AL158047.1-201ENST00000445918 881 ntBASIC21.36■■□□□ 1.01
HPS4Q9NQG7 AC142381.4-202ENST00000563973 229 ntBASIC21.36■■□□□ 1.01
HPS4Q9NQG7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.36■■□□□ 1.01
HPS4Q9NQG7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.35■■□□□ 1.01
HPS4Q9NQG7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
HPS4Q9NQG7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS4Q9NQG7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS4Q9NQG7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS4Q9NQG7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HPS4Q9NQG7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.34■■□□□ 1.01
HPS4Q9NQG7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
HPS4Q9NQG7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms