Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 AC243732.1-201ENST00000612648 864 ntBASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BRMS1Q9HCU9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
BRMS1Q9HCU9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.8■■□□□ 1.4
BRMS1Q9HCU9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 RBM17P2-201ENST00000616397 1405 ntBASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 AC011484.1-201ENST00000377652 1995 ntBASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 AC006128.1-201ENST00000624704 1661 ntBASIC23.79■■□□□ 1.4
BRMS1Q9HCU9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 PLK5-205ENST00000642079 1969 ntBASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
BRMS1Q9HCU9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BRMS1Q9HCU9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRMS1Q9HCU9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.76■■□□□ 1.39
BRMS1Q9HCU9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
BRMS1Q9HCU9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
BRMS1Q9HCU9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
BRMS1Q9HCU9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
BRMS1Q9HCU9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms