Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 REXO1L12P-201ENST00000622156 912 ntBASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.17■■■□□ 2.1
TRPM3Q9HCF6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 AC080038.3-201ENST00000623346 1952 ntBASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRPM3Q9HCF6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 TSPY15P-201ENST00000457163 923 ntBASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRPM3Q9HCF6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
TRPM3Q9HCF6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TRPM3Q9HCF6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TRPM3Q9HCF6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TRPM3Q9HCF6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 AL023875.1-201ENST00000640777 796 ntBASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRPM3Q9HCF6 KRASP1-201ENST00000407852 552 ntBASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 AC116050.2-201ENST00000612102 1779 ntBASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 PENK-204ENST00000518770 863 ntTSL 2 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC28.12■■■□□ 2.09
TRPM3Q9HCF6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM3Q9HCF6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC28.11■■■□□ 2.09
TRPM3Q9HCF6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TRPM3Q9HCF6 MIR4785-201ENST00000585005 73 ntBASIC28.11■■■□□ 2.09
TRPM3Q9HCF6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
TRPM3Q9HCF6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 AC097493.4-201ENST00000641197 219 ntBASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRPM3Q9HCF6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 AC005829.2-201ENST00000571422 1056 ntBASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
TRPM3Q9HCF6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms