Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LRTM1Q9HBL6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 AC005837.3-201ENST00000612163 286 ntBASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 FP700111.2-201ENST00000619190 1892 ntBASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
LRTM1Q9HBL6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 AC105265.2-201ENST00000467189 838 ntBASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.85■□□□□ 0.77
LRTM1Q9HBL6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LRTM1Q9HBL6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 AC020907.5-201ENST00000624372 1936 ntBASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 AC027612.3-201ENST00000413684 1047 ntBASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 AC138907.5-202ENST00000569484 235 ntBASIC19.83■□□□□ 0.77
LRTM1Q9HBL6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRTM1Q9HBL6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRTM1Q9HBL6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRTM1Q9HBL6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms