Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC30.63■■■□□ 2.49
SCAF1Q9H7N4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 AC080038.3-201ENST00000623346 1952 ntBASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 AL020996.1-203ENST00000536896 2307 ntBASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SCAF1Q9H7N4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 KRT87P-202ENST00000534226 1464 ntBASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.61■■■□□ 2.49
SCAF1Q9H7N4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 MIR4497-201ENST00000583208 89 ntBASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 LINC01521-201ENST00000504184 1943 ntBASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
SCAF1Q9H7N4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 AC092053.2-201ENST00000640557 1818 ntBASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
SCAF1Q9H7N4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 UBE2SP1-201ENST00000450587 669 ntBASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 AC073648.6-201ENST00000641589 218 ntBASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.58■■■□□ 2.49
SCAF1Q9H7N4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 MIR718-201ENST00000390190 70 ntBASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
SCAF1Q9H7N4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC30.56■■■□□ 2.48
SCAF1Q9H7N4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 AC010536.3-201ENST00000620306 533 ntBASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SCAF1Q9H7N4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms