Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RNF41Q9H4P4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 NCF1B-203ENST00000435988 1254 ntBASIC24.43■■□□□ 1.5
RNF41Q9H4P4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF41Q9H4P4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 AL121832.2-201ENST00000610979 668 ntBASIC24.42■■□□□ 1.5
RNF41Q9H4P4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RNF41Q9H4P4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 AL512625.2-201ENST00000417533 625 ntBASIC24.41■■□□□ 1.5
RNF41Q9H4P4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 AF201337.1-201ENST00000520239 748 ntBASIC24.41■■□□□ 1.5
RNF41Q9H4P4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF41Q9H4P4 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.4■■□□□ 1.5
RNF41Q9H4P4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.4■■□□□ 1.5
RNF41Q9H4P4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 AC121338.2-201ENST00000622535 1744 ntBASIC24.4■■□□□ 1.5
RNF41Q9H4P4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 AC007375.3-201ENST00000600936 2314 ntBASIC24.4■■□□□ 1.5
RNF41Q9H4P4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF41Q9H4P4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF41Q9H4P4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 AC083906.2-201ENST00000511578 360 ntBASIC24.39■■□□□ 1.49
RNF41Q9H4P4 AC105036.2-201ENST00000569468 176 ntBASIC24.39■■□□□ 1.49
RNF41Q9H4P4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF41Q9H4P4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 GPX1P1-201ENST00000388829 606 ntBASIC24.38■■□□□ 1.49
RNF41Q9H4P4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 AC100791.3-201ENST00000617619 330 ntBASIC24.38■■□□□ 1.49
RNF41Q9H4P4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF41Q9H4P4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms