Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.41■■■□□ 2.62
PTPN23Q9H3S7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPN23Q9H3S7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 AC244015.2-201ENST00000616358 1861 ntBASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
PTPN23Q9H3S7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 ESRRAP1-201ENST00000400596 1257 ntBASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 AC026366.1-201ENST00000488803 879 ntBASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTPN23Q9H3S7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
PTPN23Q9H3S7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.39■■■□□ 2.61
PTPN23Q9H3S7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 KRT18P68-201ENST00000392293 1000 ntBASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 HLA-B-256ENST00000639848 1089 ntBASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC31.38■■■□□ 2.61
PTPN23Q9H3S7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 AC006058.3-201ENST00000606217 1069 ntBASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC31.37■■■□□ 2.61
PTPN23Q9H3S7 KRT18P29-201ENST00000397031 1267 ntBASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PTPN23Q9H3S7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 GCSHP5-201ENST00000443090 522 ntBASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.35■■■□□ 2.61
PTPN23Q9H3S7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 AL356652.1-201ENST00000615962 565 ntBASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 EP400NL-214ENST00000641289 2402 ntBASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.34■■■□□ 2.61
PTPN23Q9H3S7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 AC093827.2-201ENST00000512654 315 ntBASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN23Q9H3S7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PTPN23Q9H3S7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPN23Q9H3S7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC31.32■■■□□ 2.6
PTPN23Q9H3S7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
PTPN23Q9H3S7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC31.32■■■□□ 2.6
PTPN23Q9H3S7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.32■■■□□ 2.6
PTPN23Q9H3S7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
PTPN23Q9H3S7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PTPN23Q9H3S7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms