Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN3Q9H347 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN3Q9H347 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 AC010536.3-201ENST00000620306 533 ntBASIC19.12■□□□□ 0.65
UBQLN3Q9H347 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN3Q9H347 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 KRT16P2-201ENST00000414673 1423 ntBASIC19.11■□□□□ 0.65
UBQLN3Q9H347 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 CROCCP5-201ENST00000436658 830 ntBASIC19.11■□□□□ 0.65
UBQLN3Q9H347 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 AC231657.2-201ENST00000624556 255 ntBASIC19.11■□□□□ 0.65
UBQLN3Q9H347 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 LINC01521-201ENST00000504184 1943 ntBASIC19.11■□□□□ 0.65
UBQLN3Q9H347 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN3Q9H347 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 AC120498.10-201ENST00000621827 505 ntBASIC19.1■□□□□ 0.65
UBQLN3Q9H347 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 AC061975.6-201ENST00000579045 1553 ntBASIC19.1■□□□□ 0.65
UBQLN3Q9H347 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBQLN3Q9H347 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.09■□□□□ 0.65
UBQLN3Q9H347 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms