Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 AC006128.1-201ENST00000624704 1661 ntBASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 POU5F1P4-201ENST00000413175 1085 ntBASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 KRT18P5-201ENST00000436075 1291 ntBASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 SLC7A5P2-201ENST00000553010 536 ntBASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 AC022517.1-201ENST00000592429 346 ntBASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 AP001160.3-201ENST00000601484 763 ntBASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
YIPF4Q9BSR8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
YIPF4Q9BSR8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
YIPF4Q9BSR8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
YIPF4Q9BSR8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
YIPF4Q9BSR8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 SLC25A24-204ENST00000569674 2357 ntBASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 AC010141.2-201ENST00000452426 721 ntBASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
YIPF4Q9BSR8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L2-201ENST00000561772 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L6-201ENST00000626483 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L1-201ENST00000627662 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L8-201ENST00000629013 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L3-201ENST00000630187 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L7-201ENST00000630678 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 DUX4L5-201ENST00000630834 1275 ntBASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.38■□□□□ 0.69
YIPF4Q9BSR8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 AC090192.1-201ENST00000517740 490 ntBASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.37■□□□□ 0.69
YIPF4Q9BSR8 IKBKGP1-201ENST00000612193 1073 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms