Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AC009237.3-201ENST00000393279 1427 ntBASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 AP005212.1-201ENST00000581547 1997 ntBASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMSS1Q9BQ75 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 AC073314.1-201ENST00000568729 2216 ntBASIC17.59■□□□□ 0.41
CMSS1Q9BQ75 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CMSS1Q9BQ75 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 AC133561.4-201ENST00000566112 224 ntBASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 AC126544.1-201ENST00000580842 1059 ntBASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 MIR4767-201ENST00000582827 78 ntBASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CMSS1Q9BQ75 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 AC233992.3-201ENST00000607491 485 ntBASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CMSS1Q9BQ75 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 AL136116.3-201ENST00000402907 1138 ntBASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CMSS1Q9BQ75 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms