Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCL13Q99616 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL13Q99616 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL13Q99616 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL13Q99616 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 AC091799.1-201ENST00000422823 811 ntBASIC17.3■□□□□ 0.36
CCL13Q99616 CNN2P6-201ENST00000439038 900 ntBASIC17.3■□□□□ 0.36
CCL13Q99616 CDCA4P2-201ENST00000441182 718 ntBASIC17.3■□□□□ 0.36
CCL13Q99616 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL13Q99616 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL13Q99616 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL13Q99616 AC231657.2-201ENST00000624556 255 ntBASIC17.3■□□□□ 0.36
CCL13Q99616 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCL13Q99616 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL13Q99616 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL13Q99616 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
CCL13Q99616 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCL13Q99616 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCL13Q99616 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCL13Q99616 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL13Q99616 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL13Q99616 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL13Q99616 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.29■□□□□ 0.36
CCL13Q99616 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL13Q99616 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL13Q99616 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCL13Q99616 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL13Q99616 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCL13Q99616 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL13Q99616 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCL13Q99616 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL13Q99616 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.28■□□□□ 0.36
CCL13Q99616 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCL13Q99616 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL13Q99616 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL13Q99616 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL13Q99616 AC026185.1-201ENST00000445748 174 ntBASIC17.27■□□□□ 0.36
CCL13Q99616 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL13Q99616 AL591742.1-201ENST00000604433 565 ntBASIC17.27■□□□□ 0.36
CCL13Q99616 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
CCL13Q99616 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL13Q99616 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL13Q99616 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL13Q99616 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL13Q99616 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.27■□□□□ 0.35
CCL13Q99616 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CCL13Q99616 AC121338.2-201ENST00000622535 1744 ntBASIC17.27■□□□□ 0.35
CCL13Q99616 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.27■□□□□ 0.35
CCL13Q99616 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL13Q99616 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL13Q99616 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms