Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.94■□□□□ 0.94
PHOX2BQ99453 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PHOX2BQ99453 AC079630.1-202ENST00000618127 1840 ntBASIC20.93■□□□□ 0.94
PHOX2BQ99453 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 KRT126P-201ENST00000549467 1181 ntBASIC20.93■□□□□ 0.94
PHOX2BQ99453 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 AC120498.10-201ENST00000621827 505 ntBASIC20.93■□□□□ 0.94
PHOX2BQ99453 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PHOX2BQ99453 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHOX2BQ99453 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 AC133681.1-201ENST00000465482 601 ntBASIC20.92■□□□□ 0.94
PHOX2BQ99453 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PHOX2BQ99453 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHOX2BQ99453 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
PHOX2BQ99453 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 AC026396.1-201ENST00000419388 421 ntBASIC20.91■□□□□ 0.94
PHOX2BQ99453 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.91■□□□□ 0.94
PHOX2BQ99453 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.91■□□□□ 0.94
PHOX2BQ99453 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PHOX2BQ99453 AP003071.4-201ENST00000562276 1284 ntBASIC20.91■□□□□ 0.94
PHOX2BQ99453 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.91■□□□□ 0.94
PHOX2BQ99453 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.91■□□□□ 0.94
PHOX2BQ99453 AC026471.5-201ENST00000615068 467 ntBASIC20.91■□□□□ 0.94
PHOX2BQ99453 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.91■□□□□ 0.94
PHOX2BQ99453 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.9■□□□□ 0.94
PHOX2BQ99453 AP004607.7-201ENST00000527152 1677 ntBASIC20.9■□□□□ 0.94
PHOX2BQ99453 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
PHOX2BQ99453 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.9■□□□□ 0.94
PHOX2BQ99453 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.9■□□□□ 0.94
PHOX2BQ99453 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PHOX2BQ99453 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
PHOX2BQ99453 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PHOX2BQ99453 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PHOX2BQ99453 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.89■□□□□ 0.94
PHOX2BQ99453 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PHOX2BQ99453 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.89■□□□□ 0.94
PHOX2BQ99453 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PHOX2BQ99453 KRT8P9-201ENST00000558927 1449 ntBASIC20.89■□□□□ 0.94
PHOX2BQ99453 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 UPK3BP1-201ENST00000428678 509 ntBASIC20.89■□□□□ 0.93
PHOX2BQ99453 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 DUX4L26-201ENST00000489078 1255 ntBASIC20.89■□□□□ 0.93
PHOX2BQ99453 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PHOX2BQ99453 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.89■□□□□ 0.93
PHOX2BQ99453 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PHOX2BQ99453 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PHOX2BQ99453 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PHOX2BQ99453 AC239809.2-201ENST00000415381 517 ntBASIC20.88■□□□□ 0.93
PHOX2BQ99453 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms