Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TIMD4Q96H15 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.36■□□□□ 0.37
TIMD4Q96H15 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 LSM12P1-201ENST00000411836 588 ntBASIC17.36■□□□□ 0.37
TIMD4Q96H15 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.36■□□□□ 0.37
TIMD4Q96H15 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TIMD4Q96H15 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 CD99P1-205ENST00000527459 561 ntBASIC17.35■□□□□ 0.37
TIMD4Q96H15 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 AC116050.2-201ENST00000612102 1779 ntBASIC17.35■□□□□ 0.37
TIMD4Q96H15 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.35■□□□□ 0.37
TIMD4Q96H15 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TIMD4Q96H15 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TIMD4Q96H15 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.34■□□□□ 0.37
TIMD4Q96H15 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TIMD4Q96H15 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMD4Q96H15 AC244015.2-201ENST00000616358 1861 ntBASIC17.34■□□□□ 0.37
TIMD4Q96H15 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.34■□□□□ 0.37
TIMD4Q96H15 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.34■□□□□ 0.37
TIMD4Q96H15 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TIMD4Q96H15 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
TIMD4Q96H15 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TIMD4Q96H15 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMD4Q96H15 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMD4Q96H15 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TIMD4Q96H15 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMD4Q96H15 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TIMD4Q96H15 MCRIP2P1-201ENST00000394346 511 ntBASIC17.33■□□□□ 0.36
TIMD4Q96H15 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 AC097658.1-201ENST00000475555 843 ntBASIC17.33■□□□□ 0.36
TIMD4Q96H15 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 KRT18P6-201ENST00000555540 1265 ntBASIC17.33■□□□□ 0.36
TIMD4Q96H15 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TIMD4Q96H15 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMD4Q96H15 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TIMD4Q96H15 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TIMD4Q96H15 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TIMD4Q96H15 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TIMD4Q96H15 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms