Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC46Q96FV0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC46Q96FV0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC46Q96FV0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC46Q96FV0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 MIPEPP3-201ENST00000412105 444 ntBASIC18.54■□□□□ 0.56
LRRC46Q96FV0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 AL591742.1-201ENST00000604433 565 ntBASIC18.54■□□□□ 0.56
LRRC46Q96FV0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC46Q96FV0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 AC092118.2-201ENST00000613495 667 ntBASIC18.53■□□□□ 0.56
LRRC46Q96FV0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC46Q96FV0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.52■□□□□ 0.56
LRRC46Q96FV0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 RNA5SP413-201ENST00000516373 109 ntBASIC18.52■□□□□ 0.56
LRRC46Q96FV0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
LRRC46Q96FV0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC46Q96FV0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC46Q96FV0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 AC097658.1-201ENST00000475555 843 ntBASIC18.51■□□□□ 0.55
LRRC46Q96FV0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC46Q96FV0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 KRT18P29-201ENST00000397031 1267 ntBASIC18.5■□□□□ 0.55
LRRC46Q96FV0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 AC016405.3-201ENST00000607710 860 ntBASIC18.5■□□□□ 0.55
LRRC46Q96FV0 AC243732.1-201ENST00000612648 864 ntBASIC18.5■□□□□ 0.55
LRRC46Q96FV0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRRC46Q96FV0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms