Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM11Q96F44 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM11Q96F44 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TRIM11Q96F44 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
TRIM11Q96F44 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TRIM11Q96F44 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TRIM11Q96F44 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.84■■□□□ 1.09
TRIM11Q96F44 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRIM11Q96F44 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.84■■□□□ 1.09
TRIM11Q96F44 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
TRIM11Q96F44 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM11Q96F44 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM11Q96F44 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM11Q96F44 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRIM11Q96F44 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
TRIM11Q96F44 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM11Q96F44 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM11Q96F44 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM11Q96F44 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRIM11Q96F44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 ZNRF2P3-201ENST00000424200 374 ntBASIC21.82■■□□□ 1.08
TRIM11Q96F44 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRIM11Q96F44 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.82■■□□□ 1.08
TRIM11Q96F44 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM11Q96F44 SLC7A5P2-201ENST00000553010 536 ntBASIC21.81■■□□□ 1.08
TRIM11Q96F44 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 FP700111.2-201ENST00000619190 1892 ntBASIC21.81■■□□□ 1.08
TRIM11Q96F44 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM11Q96F44 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 AC073314.1-201ENST00000568729 2216 ntBASIC21.8■■□□□ 1.08
TRIM11Q96F44 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM11Q96F44 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 AC004854.2-201ENST00000608450 1441 ntBASIC21.8■■□□□ 1.08
TRIM11Q96F44 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM11Q96F44 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
TRIM11Q96F44 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms