Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
GRAMD1AQ96CP6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 KRT19P1-201ENST00000405746 1186 ntBASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRAMD1AQ96CP6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 BX005040.4-201ENST00000637145 1518 ntBASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 KRT18P11-201ENST00000435214 1283 ntBASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 RAP2CP1-201ENST00000605103 478 ntBASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.11■□□□□ 0.97
GRAMD1AQ96CP6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 AC026471.6-201ENST00000622954 1905 ntBASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 AC026185.1-201ENST00000445748 174 ntBASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 AC087239.1-201ENST00000622671 572 ntBASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
GRAMD1AQ96CP6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 CDCA4P2-201ENST00000441182 718 ntBASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 AC073111.5-205ENST00000641717 521 ntBASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRAMD1AQ96CP6 AP005212.1-201ENST00000581547 1997 ntBASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 AP004607.4-201ENST00000530158 1459 ntBASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRAMD1AQ96CP6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms