Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN23Q96B33 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLDN23Q96B33 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN23Q96B33 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CLDN23Q96B33 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN23Q96B33 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CLDN23Q96B33 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN23Q96B33 RARRES2P10-201ENST00000564312 460 ntBASIC20.87■□□□□ 0.93
CLDN23Q96B33 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLDN23Q96B33 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLDN23Q96B33 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
CLDN23Q96B33 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN23Q96B33 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN23Q96B33 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN23Q96B33 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN23Q96B33 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CLDN23Q96B33 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN23Q96B33 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLDN23Q96B33 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 KRASP1-201ENST00000407852 552 ntBASIC20.85■□□□□ 0.93
CLDN23Q96B33 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 AL355075.4-201ENST00000554988 638 ntBASIC20.85■□□□□ 0.93
CLDN23Q96B33 AC005829.2-201ENST00000571422 1056 ntBASIC20.85■□□□□ 0.93
CLDN23Q96B33 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLDN23Q96B33 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CLDN23Q96B33 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 PRKY-204ENST00000533551 1019 ntBASIC20.84■□□□□ 0.93
CLDN23Q96B33 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN23Q96B33 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN23Q96B33 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN23Q96B33 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CLDN23Q96B33 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLDN23Q96B33 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
CLDN23Q96B33 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN23Q96B33 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN23Q96B33 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.83■□□□□ 0.93
CLDN23Q96B33 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN23Q96B33 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN23Q96B33 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN23Q96B33 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
CLDN23Q96B33 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN23Q96B33 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN23Q96B33 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN23Q96B33 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN23Q96B33 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.82■□□□□ 0.92
CLDN23Q96B33 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN23Q96B33 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN23Q96B33 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.82■□□□□ 0.92
CLDN23Q96B33 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN23Q96B33 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN23Q96B33 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN23Q96B33 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN23Q96B33 AC116050.2-201ENST00000612102 1779 ntBASIC20.82■□□□□ 0.92
CLDN23Q96B33 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN23Q96B33 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN23Q96B33 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN23Q96B33 AC068473.5-201ENST00000616428 2072 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms