Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX1Q92499 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX1Q92499 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX1Q92499 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX1Q92499 AC120498.10-201ENST00000621827 505 ntBASIC22.05■■□□□ 1.12
DDX1Q92499 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
DDX1Q92499 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX1Q92499 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX1Q92499 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
DDX1Q92499 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
DDX1Q92499 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.04■■□□□ 1.12
DDX1Q92499 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
DDX1Q92499 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 KRT19P1-201ENST00000405746 1186 ntBASIC22.04■■□□□ 1.12
DDX1Q92499 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX1Q92499 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 SLC7A5P1-201ENST00000568957 537 ntBASIC22.04■■□□□ 1.12
DDX1Q92499 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX1Q92499 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
DDX1Q92499 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
DDX1Q92499 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX1Q92499 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
DDX1Q92499 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX1Q92499 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX1Q92499 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX1Q92499 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.03■■□□□ 1.12
DDX1Q92499 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX1Q92499 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.03■■□□□ 1.12
DDX1Q92499 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
DDX1Q92499 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.03■■□□□ 1.12
DDX1Q92499 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.03■■□□□ 1.12
DDX1Q92499 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
DDX1Q92499 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
DDX1Q92499 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
DDX1Q92499 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX1Q92499 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
DDX1Q92499 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
DDX1Q92499 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.02■■□□□ 1.12
DDX1Q92499 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX1Q92499 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX1Q92499 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX1Q92499 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.02■■□□□ 1.12
DDX1Q92499 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.02■■□□□ 1.12
DDX1Q92499 AC245052.3-201ENST00000450182 901 ntBASIC22.02■■□□□ 1.12
DDX1Q92499 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.02■■□□□ 1.12
DDX1Q92499 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX1Q92499 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.02■■□□□ 1.12
DDX1Q92499 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.02■■□□□ 1.12
DDX1Q92499 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.02■■□□□ 1.12
DDX1Q92499 BID-214ENST00000617586 542 ntTSL 5 BASIC22.02■■□□□ 1.12
DDX1Q92499 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
DDX1Q92499 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
DDX1Q92499 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
DDX1Q92499 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
DDX1Q92499 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
DDX1Q92499 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.01■■□□□ 1.11
DDX1Q92499 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX1Q92499 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.01■■□□□ 1.11
DDX1Q92499 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.01■■□□□ 1.11
DDX1Q92499 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 AC007225.1-201ENST00000566331 1836 ntBASIC22.01■■□□□ 1.11
DDX1Q92499 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
DDX1Q92499 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
DDX1Q92499 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms