Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 AC233263.1-201ENST00000578059 224 ntBASIC16.17■□□□□ 0.18
LINC01006Q8NI28 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 AC069544.1-201ENST00000609399 999 ntBASIC16.17■□□□□ 0.18
LINC01006Q8NI28 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC01006Q8NI28 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LINC01006Q8NI28 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 POM121L13P-201ENST00000422362 380 ntBASIC16.15■□□□□ 0.18
LINC01006Q8NI28 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC01006Q8NI28 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LINC01006Q8NI28 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 C2orf69P4-201ENST00000565394 541 ntBASIC16.14■□□□□ 0.17
LINC01006Q8NI28 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC01006Q8NI28 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC01006Q8NI28 MIR4497-201ENST00000583208 89 ntBASIC16.13■□□□□ 0.17
LINC01006Q8NI28 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms