Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 AL137784.2-201ENST00000607332 1000 ntBASIC18.07■□□□□ 0.48
CPEB3Q8NE35 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPEB3Q8NE35 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 MFSD11-216ENST00000590393 1141 ntBASIC18.06■□□□□ 0.48
CPEB3Q8NE35 AC092437.1-201ENST00000624794 1048 ntBASIC18.06■□□□□ 0.48
CPEB3Q8NE35 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPEB3Q8NE35 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 PLK5-205ENST00000642079 1969 ntBASIC18.05■□□□□ 0.48
CPEB3Q8NE35 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 AC243732.1-201ENST00000612648 864 ntBASIC18.05■□□□□ 0.48
CPEB3Q8NE35 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 AC010536.3-201ENST00000620306 533 ntBASIC18.05■□□□□ 0.48
CPEB3Q8NE35 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.05■□□□□ 0.48
CPEB3Q8NE35 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.04■□□□□ 0.48
CPEB3Q8NE35 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 AC011767.1-201ENST00000617410 1153 ntBASIC18.04■□□□□ 0.48
CPEB3Q8NE35 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPEB3Q8NE35 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 AC121338.2-201ENST00000622535 1744 ntBASIC18.03■□□□□ 0.48
CPEB3Q8NE35 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 AC091799.1-201ENST00000422823 811 ntBASIC18.03■□□□□ 0.48
CPEB3Q8NE35 TERF1P5-201ENST00000477545 1207 ntBASIC18.03■□□□□ 0.48
CPEB3Q8NE35 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms