Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SIMC1Q8NDZ2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SIMC1Q8NDZ2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 RARRES2P11-201ENST00000635158 484 ntBASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 PLK5-205ENST00000642079 1969 ntBASIC19.43■□□□□ 0.7
SIMC1Q8NDZ2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 KRT16P2-201ENST00000414673 1423 ntBASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 AC022517.1-201ENST00000592429 346 ntBASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 IKBKGP1-201ENST00000612193 1073 ntBASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SIMC1Q8NDZ2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 AC137761.2-201ENST00000561729 223 ntBASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 AC145350.3-201ENST00000569033 163 ntBASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
SIMC1Q8NDZ2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 KRT18P20-201ENST00000548986 1279 ntBASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.4■□□□□ 0.7
SIMC1Q8NDZ2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms