Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC71LQ8N9Z2 AL391422.3-201ENST00000603791 2761 ntBASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC71LQ8N9Z2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC71LQ8N9Z2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 DUX4L19-201ENST00000557448 1267 ntBASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC71LQ8N9Z2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CCDC71LQ8N9Z2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.14■□□□□ 0.34
CCDC71LQ8N9Z2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 MIR3621-201ENST00000580529 85 ntBASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 FP700111.2-201ENST00000619190 1892 ntBASIC17.14■□□□□ 0.33
CCDC71LQ8N9Z2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 PCDHAC2-203ENST00000615316 3011 ntBASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms