Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 AC096631.2-201ENST00000436136 790 ntBASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 AC027702.1-201ENST00000563810 1770 ntBASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCNYL1Q8N7R7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.37■□□□□ 0.85
CCNYL1Q8N7R7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 AC008406.3-201ENST00000620001 1374 ntBASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCNYL1Q8N7R7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 FP700111.2-201ENST00000619190 1892 ntBASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCNYL1Q8N7R7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.34■□□□□ 0.85
CCNYL1Q8N7R7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCNYL1Q8N7R7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms