Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 AC104187.1-201ENST00000607510 612 ntBASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 AL391262.2-201ENST00000622466 494 ntBASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LINC00528Q8N1L1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 AL121832.2-201ENST00000610979 668 ntBASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 TMEM191A-211ENST00000637163 1067 ntBASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00528Q8N1L1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 LINC01521-201ENST00000504184 1943 ntBASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 AC231657.2-201ENST00000624556 255 ntBASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 AF106564.1-201ENST00000607058 2553 ntBASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00528Q8N1L1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LINC00528Q8N1L1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00528Q8N1L1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00528Q8N1L1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00528Q8N1L1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00528Q8N1L1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00528Q8N1L1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 ANKRD19P-201ENST00000338192 862 ntBASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 AC007322.1-201ENST00000426983 750 ntBASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00528Q8N1L1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms